plot_base_coverage

plot_base_coverage

plot_base_coverage(
  sum_matrix,
  sum_matrix_qc,
  selected_cells,
  interactive = FALSE,
  text_size = 10
)

Arguments

sum_matrix

First element returned by the function get_heteroplasmy.

sum_matrix_qc

Second element returned by the function get_heteroplasmy.

selected_cells

Character vector with cells used fro plotting the coverage.

interactive

Logical. If TRUE an interactive plot is produced.

text_size

Character specifying the size of the text for ggplot2.

Value

ggplot2 object (if interactive=FALSE) or plotly object (if (if interactive=TRUE)

See also

https://plotly.com/r/

Author

Gabriele Lubatti gabriele.lubatti@helmholtz-muenchen.de